1-2 October 2020
Europe/Berlin timezone

Program & Links

Program overview

The program and abstracts can be found here and here (PDF).


Zoom links

Main session: https://uni-jena-de.zoom.us/j/98494967062


Networking rooms:

Room Zoom link
Networking room 1 https://zoom.us/j/95264577146
Networking room 2 https://zoom.us/j/95961040814
Networking room 3 https://zoom.us/j/93652750901
Networking room 4 https://zoom.us/j/98203731366
Networking room 5 https://zoom.us/j/91788950314
Networking room 6 https://zoom.us/j/97556398627


Poster sessions I & II: (Thursday, October 1, 2020)

Room Speaker Title Zoom link
Poster room 1 Javier Pizarro-Cerda A role for Taok2 in Listeria monocytogenes vacuolar escape https://zoom.us/j/98497017563
Poster room 2 Sindi Nexhipi Automated and high-throughput quantification of microglia activation to map radiation-induced inflammation https://zoom.us/j/94312158870
Poster room 3 Nia Siradze Automatic recognition and counting of fossil pollen - how far are we? https://zoom.us/j/92049885133
Poster room 4 Astrid Tannert Bacterial shape changes for fast detection of antibiotic susceptibility https://zoom.us/j/96662715480
Poster room 5 Hannah Jeckel BiofilmQ, a quantiative image analysis tool https://zoom.us/j/98480053106
Poster room 6 Ivan Belayaev Enhanced segmentation of label-free cells for automated migration and interaction tracking https://zoom.us/j/99718935391
Poster room 7 Emad Alamoudi FitMultiCell: Simulating and parameterizating computational models of multi-cellular processes https://zoom.us/j/94203184958
Poster room 8

Raquel Alonso-Roman,

Stefan Hoffmann

Image-based analysis of Candida albicans invasion in a gut-on-chip model https://zoom.us/j/97444597455
Poster room 9 Ruman Gerst JIPipe: a graphical batch-Processing language for ImageJ https://zoom.us/j/98824538457
Poster room 10 Lutz Brusch Morpheus: A user-friendly simulation framework for multi-cellular systems biology https://zoom.us/j/92223485718
Poster room 11 Alexander Tille Quantification of the dynamics of fungal confrontation assays https://zoom.us/j/93808261906

Poster room 12

Mai T.N. Hoang,

Susann Hartung

Quantitative characterisation of Aspergillus fumigatus hyphal growth and branching behaviour in an “Invasive aspergillosis-on-a-chip” disease model of the Human lung https://zoom.us/j/92343860204
Poster room 13

Fatina Siwczak,

Zoltán Cseresnyés

Role of hepatic macrophage polarization in the acute phase of bacteraemia with Staphylococcus aureus https://zoom.us/j/95460419062
Poster room 14 Sandra Timme Virtual phagocytosis assays reveal strain-specific differences in the microscopic parameters of the interaction between alveolar macrophages and two Aspergillus fumigatus strains https://zoom.us/j/91061289615


Poster sessions III & IV: (Friday, October 2, 2020)

Room Speaker Title Zoom link
Poster room 1 Akanksha Bhargava A Multimodality and Multiscale Imaging Pipeline for Image-Based Vascular Systems Biology https://zoom.us/j/98497017563
Poster room 2

Alain Pulfer,

Diego Ulisse Pizzagalli

Action recognition in intravital microscopy: detecting cell death in vivo https://zoom.us/j/94312158870
Poster room 3 Ian Estabrook Automated detection of nascent myofibrils during myofibrillogenesis https://zoom.us/j/92049885133
Poster room 4

Franziska Hoffmann,

Jan-Philipp Praetorius

Automatic Segmentation and Classification of Fungal-Infected Tissue using Deep Learning https://zoom.us/j/96662715480
Poster room 5 Muriel Heldring Data-driven kinetic modeling of p53 signaling linked to cell Cycle progression https://zoom.us/j/98480053106
Poster room 6 Carl-Magnus Svensson Dynamic Bayesian networks for the analysis of causal interactions in cell track data https://zoom.us/j/99718935391
Poster room 7

Nancy Unger

Intracellular Raman micro-spectroscopic detection of Coxiella burnetii and discrimination of their morphoforms in infected Buffalo Green Monkey cells https://zoom.us/j/94203184958
Poster room 8 Ruman Gerst MISA++: a modular and high-performance framework for analysis of light sheet microscopy images https://zoom.us/j/97444597455
Poster room 9 Bianca Hoffmann Objective and quantitative assessment of liver function by pixel-wise kinetic clustering of MSOT images https://zoom.us/j/98824538457
Poster room 10 Benjamin Schmid Reproducible 3D animations using natural language with 3Dscript https://zoom.us/j/92223485718
Poster room 11 Joy Bordini Semi-supervised machine learning facilitates
tracking of fluorescent immune cells in intravital microscopy
Poster room 12 Justina Stark Simulating morphogen gradients in zebrafish epiboly https://zoom.us/j/92343860204
Poster room 13

Agustín Andrés Corbat,

Mauro Silberberg

Unravelling apoptotic signalling cascade by co-imaging extrinsic, intrinsic and effector caspase activity by fluorescence anisotropy microscopy https://zoom.us/j/95460419062