Schedule
11:00 – 12:30
Registration & Light Lunch
12:30 – 12:40
Opening of IbSB 2022
Session I
12:40 – 14:30
12:40 – 13:20
AI-based Image-to-Image Transformation for Microscopy Image Analysis: Concepts, Tools and Validations
40 min
Jianxu Chen
In order to see the abstract, you need to be a registered participant of the IbSB 2022 and log in here.
13:20 – 13:50
Characterization of neutrophil activation phenotypes in ex vivo human Candida blood infections using deep learning modules
30 min
Jan-Philipp Praetorius & Arjun Sarkar
In order to see the abstract, you need to be a registered participant of the IbSB 2022 and log in here.
13:50 – 14:10
Automatic quantification of fungal burden in histology images using deep neural networks
20 min
Rahman Attar
In order to see the abstract, you need to be a registered participant of the IbSB 2022 and log in here.
14:10 – 14:30
Deep Learning for Antibiotic Target Identification from High-Throughput Images
20 min
Daniel Krentzel
In order to see the abstract, you need to be a registered participant of the IbSB 2022 and log in here.
14:30 – 14:50
Coffee Break
Session II
14:50 – 16:20
14:50 – 15:30
VascuViz: A Multimodality and Multiscale Imaging and Visualization Pipeline for Vascular Systems Biology
40 min
Akanksha Bhargava
In order to see the abstract, you need to be a registered participant of the IbSB 2022 and log in here.
15:30 – 16:00
Visualization and systemic quantification of fluorescence-tagged nanoparticles through intravital microscopy
30 min
Zoltán Cseresnyés & Wanling Foo
In order to see the abstract, you need to be a registered participant of the IbSB 2022 and log in here.
16:00 – 16:20
TBD
16:20 – 16:40
Coffee Break
Session III
16:40 – 18:10
16:40 – 17:20
Tissue and cell shape quantification integrated with models of morphogenesis in plant shoots and flowers
40 min
Henrik Jönsson
In order to see the abstract, you need to be a registered participant of the IbSB 2022 and log in here.
17:20 – 17:50
Inferring characteristics of bacterial swimming in biofilm matrix from time-lapse confocal laser scanning microscopy
30 min
Romain Briandet & Simon Labarthe
In order to see the abstract, you need to be a registered participant of the IbSB 2022 and log in here.
17:50 – 18:10
Towards data-driven modeling of spatio-temporal immune cell interaction dynamics
20 min
Kevin Thurley
In order to see the abstract, you need to be a registered participant of the IbSB 2022 and log in here.
18:10 – 18:40
Dinner
Poster session
18:40 – 20:00
Session IV
09:00 – 10:50
09:00 – 09:40
Bioimage analysis software platforms to perform tracking of cells and organelles in large samples
40 min
Jean-Yves Tinevez
In order to see the abstract, you need to be a registered participant of the IbSB 2022 and log in here.
09:40 – 10:10
Detection of serosa contraction waves with PIV from 3D recordings of the embryonic development of Tribolium Castaneum
30 min
Mariia Golden & Marc Pereyra
In order to see the abstract, you need to be a registered participant of the IbSB 2022 and log in here.
10:10 – 10:30
A tracking graph structure function for live cell microscopy
20 min
Layton Aho
In order to see the abstract, you need to be a registered participant of the IbSB 2022 and log in here.
10:30 – 10:50
Insights into the 3D subcellular impact of viral infection in an abundant marine diatom
20 min
Marie Walde
In order to see the abstract, you need to be a registered participant of the IbSB 2022 and log in here.
10:50 – 11:10
Coffee Break
Session V
11:10 – 12:40
11:10 – 11:50
Quantitative approaches for decoding molecular and microenvironmental factors underlying tissue architecture
40 min
Heba Sailem
In order to see the abstract, you need to be a registered participant of the IbSB 2022 and log in here.
11:50 – 12:20
Image-based analysis of Candida albicans infection in a gut-on-chip model
30 min
Parastoo Akbarimoghaddam & Raquel Alonso-Roman
In order to see the abstract, you need to be a registered participant of the IbSB 2022 and log in here.
12:20 – 12:40
TissUUmaps 3: Interactive visualization and exploration of spatial omics data
20 min
Axel Andersson
In order to see the abstract, you need to be a registered participant of the IbSB 2022 and log in here.
12:40 – 13:30
Lunch Break
Session VI
13:30 – 16:20
13:30 – 13:40
An Introduction to InfectoOptics
13:40 – 14:10
Generation of an alveolus-on-chip model for personalized drug screening against viral-bacterial co-infections in viral pneumonia
30 min
Lena Gauthier & Hristina Koceva
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14:10 – 14:40
VersaDrop: Versatile Droplet Handling and Deeper Analysis for Microbiological Applications
30 min
Anne-Sophie Munser & Ashkan Samimi
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14:40 – 15:10
Nanoscale Investigations of Candidalysin using Atomic Force Microscopy and Enhanced Raman Spectroscopy
30 min
Johannes Sonnenberger & Xiaobin Yao
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15:10 – 15:30
Coffee Break
15:30 – 16:00
IntraPerSpective: The Raman perspective on intracellular infections in comparison to established transmission electron microscopy
30 min
Elisabeth Liebler-Tenorio & Ute Neugebauer
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16:00 – 16:20
Spectroscopic and synthetic tools for detection of small molecular markers of infection processes
20 min
Constanze Schultz
In order to see the abstract, you need to be a registered participant of the IbSB 2022 and log in here.
16:20 – 16:30
Closing Remarks